Place the flour into a microwave-safe bowl, and heat in the microwave for 40 seconds. In a large bowl, mix butter with sugar until fluffy. Add in the vanilla extract and mix until smooth.
Add in the heated flour and mix until a thick dough forms. Divide the cookie dough into three bowls, and mix one with blue food coloring and one with red food coloring.
Take a small amount of each cookie dough and roll together into balls. Place the chocolate chips into a microwave-safe bowl, and heat in the microwave in 30-second intervals, stirring well until it is fully melted and smooth.
Coat each cookie dough truffle in the chocolate and set onto a plate. Let sit until it is completely set.