Preheat the oven to 350 F. In a medium bowl, whisk together flour, salt, and baking soda. In a large bowl, mix together butter, peanut butter, granulated sugar, and brown sugar until fluffy.
Add in the egg and vanilla extract, and mix until smooth. Add in the flour mixture, and mix until it is fully combined. Divide the cookie dough into two bowls, and add green food coloring to one and blue to the other.
Fold 1/2 cup chocolate chips into each cookie dough. Take a small amount of each cookie dough and roll together into balls. Place onto a large ungreased baking sheet at least 2-inches apart. Bake for 10-12 minutes.